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Cluster: CGMR059534_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_43242 k141_43242_9 8414 9469 - 3.A.1.1.11
TC k141_43242 k141_43242_10 9487 10470 - 3.A.1.1.11
pfam k141_43242 k141_43242_11 10486 13449 - DUF5696
pfam k141_43242 k141_43242_12 13468 15603 - Yip1
TC k141_43242 k141_43242_13 15614 16486 - 3.A.1.1.36
TC k141_43242 k141_43242_14 16486 17433 - 3.A.1.1.23
STP k141_43242 k141_43242_15 17533 20691 - SBP_bac_1
CAZyme k141_43242 k141_43242_16 21464 22435 - CE4
TF k141_43242 k141_43242_17 22665 23105 + Rrf2
pfam k141_43242 k141_43242_18 23102 25444 + Competence
CAZyme k141_43242 k141_43242_19 25849 28116 + GH31_16
Gene ID: k141_43242_9
Type: TC
Location: 8414 - 9469 (-)
Gene ID: k141_43242_10
Type: TC
Location: 9487 - 10470 (-)
Gene ID: k141_43242_11
Type: pfam
Location: 10486 - 13449 (-)
Gene ID: k141_43242_12
Type: pfam
Location: 13468 - 15603 (-)
Gene ID: k141_43242_13
Type: TC
Location: 15614 - 16486 (-)
Gene ID: k141_43242_14
Type: TC
Location: 16486 - 17433 (-)
Gene ID: k141_43242_15
Type: STP
Location: 17533 - 20691 (-)
Gene ID: k141_43242_16
Type: CAZyme
Location: 21464 - 22435 (-)
Gene ID: k141_43242_17
Type: TF
Location: 22665 - 23105 (+)
Gene ID: k141_43242_18
Type: pfam
Location: 23102 - 25444 (+)
Gene ID: k141_43242_19
Type: CAZyme
Location: 25849 - 28116 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
Avispirillum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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