Cluster: CGMR059482_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059482
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_102170 | k141_102170_39 | 56817 | 58199 | - | GH4 |
| TC | k141_102170 | k141_102170_40 | 58203 | 59819 | - | 4.A.1.1.3 |
| pfam | k141_102170 | k141_102170_41 | 59919 | 60785 | - | PRD | PRD | CAT_RBD |
| TC | k141_102170 | k141_102170_42 | 60792 | 61304 | - | 4.A.1.2.5 |
| STP | k141_102170 | k141_102170_43 | 61648 | 62409 | - | Fer4 |
| TC | k141_102170 | k141_102170_44 | 63032 | 65281 | - | 1.I.1.1.3 |
Gene ID: k141_102170_39
Type: CAZyme
Location: 56817 - 58199 (-)
Type: CAZyme
Location: 56817 - 58199 (-)
Gene ID: k141_102170_40
Type: TC
Location: 58203 - 59819 (-)
Type: TC
Location: 58203 - 59819 (-)
Gene ID: k141_102170_41
Type: pfam
Location: 59919 - 60785 (-)
Type: pfam
Location: 59919 - 60785 (-)
Gene ID: k141_102170_42
Type: TC
Location: 60792 - 61304 (-)
Type: TC
Location: 60792 - 61304 (-)
Gene ID: k141_102170_43
Type: STP
Location: 61648 - 62409 (-)
Type: STP
Location: 61648 - 62409 (-)
Gene ID: k141_102170_44
Type: TC
Location: 63032 - 65281 (-)
Type: TC
Location: 63032 - 65281 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp019041915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.