Cluster: CGMR059482_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059482
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_117509 | k141_117509_24 | 24423 | 25175 | - | 3.A.1.3.20 |
| TC | k141_117509 | k141_117509_25 | 25188 | 26549 | - | 3.A.1.3.16 |
| TC | k141_117509 | k141_117509_26 | 26667 | 27527 | - | 3.A.1.3.15 |
| pfam | k141_117509 | k141_117509_27 | 27675 | 28541 | - | AP_endonuc_2 |
| CAZyme | k141_117509 | k141_117509_28 | 28708 | 29727 | - | GH109 |
Gene ID: k141_117509_24
Type: TC
Location: 24423 - 25175 (-)
Type: TC
Location: 24423 - 25175 (-)
Gene ID: k141_117509_25
Type: TC
Location: 25188 - 26549 (-)
Type: TC
Location: 25188 - 26549 (-)
Gene ID: k141_117509_26
Type: TC
Location: 26667 - 27527 (-)
Type: TC
Location: 26667 - 27527 (-)
Gene ID: k141_117509_27
Type: pfam
Location: 27675 - 28541 (-)
Type: pfam
Location: 27675 - 28541 (-)
Gene ID: k141_117509_28
Type: CAZyme
Location: 28708 - 29727 (-)
Type: CAZyme
Location: 28708 - 29727 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp019041915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.