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Cluster: CGMR059482_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_78583 k141_78583_62 65606 67069 + 2.A.3.2.3
TC k141_78583 k141_78583_63 67705 70065 + 9.A.8.1.6
TC k141_78583 k141_78583_64 70380 72044 + 4.A.1.1.3
TF k141_78583 k141_78583_65 72107 72859 - HTH_6
CAZyme k141_78583 k141_78583_66 73035 74408 + GH4
NULL(UNKNOWN) k141_78583 k141_78583_67 74574 75326 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_78583 k141_78583_68 75502 76698 + 2.A.1.2.18
CAZyme k141_78583 k141_78583_69 76852 78228 + GH13_20
Gene ID: k141_78583_62
Type: TC
Location: 65606 - 67069 (+)
Gene ID: k141_78583_63
Type: TC
Location: 67705 - 70065 (+)
Gene ID: k141_78583_64
Type: TC
Location: 70380 - 72044 (+)
Gene ID: k141_78583_65
Type: TF
Location: 72107 - 72859 (-)
Gene ID: k141_78583_66
Type: CAZyme
Location: 73035 - 74408 (+)
Gene ID: k141_78583_67
Type:
Location: 74574 - 75326 (+)
Gene ID: k141_78583_68
Type: TC
Location: 75502 - 76698 (+)
Gene ID: k141_78583_69
Type: CAZyme
Location: 76852 - 78228 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_78583_62 vegan > omnivore 1.44006 0.01560
k141_78583_66 vegan > omnivore 1.41453 0.01560
k141_78583_67 vegan > omnivore 1.63810 0.01560

🧭 Explore Read Mapping of CGC

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