Cluster: CGMR058989_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR058989
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_168615 | k141_168615_28 | 29368 | 30237 | - | 2.A.4.7.6 |
| NULL(UNKNOWN) | k141_168615 | k141_168615_29 | 30405 | 30671 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_168615 | k141_168615_30 | 30779 | 31927 | - | Aminotran_1_2 |
| TC | k141_168615 | k141_168615_31 | 32003 | 32725 | - | 3.A.1.3.15 |
| TC | k141_168615 | k141_168615_32 | 32718 | 34166 | - | 3.A.1.3.20 |
| pfam | k141_168615 | k141_168615_33 | 34330 | 35394 | + | Fe-ADH | Fe-ADH_2 |
| CAZyme | k141_168615 | k141_168615_34 | 35645 | 37078 | + | GH1 |
Gene ID: k141_168615_28
Type: TC
Location: 29368 - 30237 (-)
Type: TC
Location: 29368 - 30237 (-)
Gene ID: k141_168615_29
Type:
Location: 30405 - 30671 (-)
Type:
Location: 30405 - 30671 (-)
Gene ID: k141_168615_30
Type: STP
Location: 30779 - 31927 (-)
Type: STP
Location: 30779 - 31927 (-)
Gene ID: k141_168615_31
Type: TC
Location: 32003 - 32725 (-)
Type: TC
Location: 32003 - 32725 (-)
Gene ID: k141_168615_32
Type: TC
Location: 32718 - 34166 (-)
Type: TC
Location: 32718 - 34166 (-)
Gene ID: k141_168615_33
Type: pfam
Location: 34330 - 35394 (+)
Type: pfam
Location: 34330 - 35394 (+)
Gene ID: k141_168615_34
Type: CAZyme
Location: 35645 - 37078 (+)
Type: CAZyme
Location: 35645 - 37078 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus
Species
Vagococcus fluvialis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.