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Cluster: CGMR058989_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_91716 k141_91716_2 1012 2406 + GH4
pfam k141_91716 k141_91716_3 2469 3068 - YitT_membrane
TC k141_91716 k141_91716_4 3196 4035 - 3.A.1.24.6
TC k141_91716 k141_91716_5 4049 4729 - 3.A.1.24.3
TC k141_91716 k141_91716_6 4729 5805 - 3.A.1.24.6
pfam k141_91716 k141_91716_7 6574 7227 + Carb_anhydrase
TC k141_91716 k141_91716_8 7305 7826 - 3.A.1.25.5
TF k141_91716 k141_91716_9 7904 8884 - HTH_11
TC k141_91716 k141_91716_10 8978 9631 - 3.A.1.3.16
Gene ID: k141_91716_2
Type: CAZyme
Location: 1012 - 2406 (+)
Gene ID: k141_91716_3
Type: pfam
Location: 2469 - 3068 (-)
Gene ID: k141_91716_4
Type: TC
Location: 3196 - 4035 (-)
Gene ID: k141_91716_5
Type: TC
Location: 4049 - 4729 (-)
Gene ID: k141_91716_6
Type: TC
Location: 4729 - 5805 (-)
Gene ID: k141_91716_7
Type: pfam
Location: 6574 - 7227 (+)
Gene ID: k141_91716_8
Type: TC
Location: 7305 - 7826 (-)
Gene ID: k141_91716_9
Type: TF
Location: 7904 - 8884 (-)
Gene ID: k141_91716_10
Type: TC
Location: 8978 - 9631 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Vagococcaceae
→
Genus
Vagococcus
→
Species
Vagococcus fluvialis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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