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Cluster: CGMR058989_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_966 k141_966_11 11285 12040 + 3.A.1.14.7
STP k141_966 k141_966_12 12056 13024 + Peripla_BP_2
TC k141_966 k141_966_13 13231 14985 + 3.D.10.1.6
NULL(UNKNOWN) k141_966 k141_966_14 15041 15529 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_966 k141_966_15 15611 16903 - 4.A.3.2.6
NULL(UNKNOWN) k141_966 k141_966_16 16935 17237 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_966 k141_966_17 17518 18951 + GH1
STP k141_966 k141_966_18 18962 19855 + SIS
pfam k141_966 k141_966_19 19874 20773 + BcrAD_BadFG
CAZyme k141_966 k141_966_20 20770 21861 + GH170
Gene ID: k141_966_11
Type: TC
Location: 11285 - 12040 (+)
Gene ID: k141_966_12
Type: STP
Location: 12056 - 13024 (+)
Gene ID: k141_966_13
Type: TC
Location: 13231 - 14985 (+)
Gene ID: k141_966_14
Type:
Location: 15041 - 15529 (-)
Gene ID: k141_966_15
Type: TC
Location: 15611 - 16903 (-)
Gene ID: k141_966_16
Type:
Location: 16935 - 17237 (-)
Gene ID: k141_966_17
Type: CAZyme
Location: 17518 - 18951 (+)
Gene ID: k141_966_18
Type: STP
Location: 18962 - 19855 (+)
Gene ID: k141_966_19
Type: pfam
Location: 19874 - 20773 (+)
Gene ID: k141_966_20
Type: CAZyme
Location: 20770 - 21861 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Vagococcaceae
→
Genus
Vagococcus
→
Species
Vagococcus fluvialis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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