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Cluster: CGMR058933_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_88974 k141_88974_1 2 1531 + 3.A.1.1.9
TC k141_88974 k141_88974_2 1599 2585 + 3.A.1.1.10
TC k141_88974 k141_88974_3 2601 3485 + 3.A.1.1.29
CAZyme k141_88974 k141_88974_4 3554 5749 + GH106
CAZyme k141_88974 k141_88974_5 5736 6557 + CE4
CAZyme k141_88974 k141_88974_6 6568 8454 + GH2
pfam k141_88974 k141_88974_7 8542 9822 + Cu_amine_oxidN1 | Glyco_hydro2_C5
NULL(UNKNOWN) k141_88974 k141_88974_8 9833 10093 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_88974 k141_88974_9 10093 11079 + GH43_24
Gene ID: k141_88974_1
Type: TC
Location: 2 - 1531 (+)
Gene ID: k141_88974_2
Type: TC
Location: 1599 - 2585 (+)
Gene ID: k141_88974_3
Type: TC
Location: 2601 - 3485 (+)
Gene ID: k141_88974_4
Type: CAZyme
Location: 3554 - 5749 (+)
Gene ID: k141_88974_5
Type: CAZyme
Location: 5736 - 6557 (+)
Gene ID: k141_88974_6
Type: CAZyme
Location: 6568 - 8454 (+)
Gene ID: k141_88974_7
Type: pfam
Location: 8542 - 9822 (+)
Gene ID: k141_88974_8
Type:
Location: 9833 - 10093 (+)
Gene ID: k141_88974_9
Type: CAZyme
Location: 10093 - 11079 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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