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Cluster: CGMR058641_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_1039534 k141_1039534_2 649 2670 - GH13_7
CAZyme k141_1039534 k141_1039534_3 2914 4122 + GH53
pfam k141_1039534 k141_1039534_4 5004 6380 - SusF_N
pfam k141_1039534 k141_1039534_5 6443 7630 - SusE | SusF_SusE
TC k141_1039534 k141_1039534_6 7688 9295 - 8.A.46.1.1
TC k141_1039534 k141_1039534_7 9315 12386 - 1.B.14.6.1
TF k141_1039534 k141_1039534_8 12667 13686 + LacI
TC k141_1039534 k141_1039534_9 13749 15062 + 2.A.2.6.2
CAZyme k141_1039534 k141_1039534_10 16180 18936 + GH77
CAZyme k141_1039534 k141_1039534_11 19030 21162 + GH97
CAZyme k141_1039534 k141_1039534_12 21183 23093 + GH13_14
Gene ID: k141_1039534_2
Type: CAZyme
Location: 649 - 2670 (-)
Gene ID: k141_1039534_3
Type: CAZyme
Location: 2914 - 4122 (+)
Gene ID: k141_1039534_4
Type: pfam
Location: 5004 - 6380 (-)
Gene ID: k141_1039534_5
Type: pfam
Location: 6443 - 7630 (-)
Gene ID: k141_1039534_6
Type: TC
Location: 7688 - 9295 (-)
Gene ID: k141_1039534_7
Type: TC
Location: 9315 - 12386 (-)
Gene ID: k141_1039534_8
Type: TF
Location: 12667 - 13686 (+)
Gene ID: k141_1039534_9
Type: TC
Location: 13749 - 15062 (+)
Gene ID: k141_1039534_10
Type: CAZyme
Location: 16180 - 18936 (+)
Gene ID: k141_1039534_11
Type: CAZyme
Location: 19030 - 21162 (+)
Gene ID: k141_1039534_12
Type: CAZyme
Location: 21183 - 23093 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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