Cluster: CGMR058641_CGC1
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 9
- Substrate:
- Genome ID: CGMR058641
- CGC Family ID: CGCFAM_03865
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1052895 | k141_1052895_2 | 2125 | 5457 | + | 1.B.14.6.1 |
| pfam | k141_1052895 | k141_1052895_3 | 5483 | 7687 | + | SusD_RagB | SusD-like_3 |
| TC | k141_1052895 | k141_1052895_4 | 8055 | 9287 | + | 2.A.23.4.1 |
| CAZyme | k141_1052895 | k141_1052895_5 | 9438 | 11120 | - | PL1_2 |
| NULL(UNKNOWN) | k141_1052895 | k141_1052895_6 | 11302 | 11553 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_1052895 | k141_1052895_7 | 12265 | 13722 | + | AP_endonuc_2 | DUF3826 |
| CAZyme | k141_1052895 | k141_1052895_8 | 13771 | 15846 | + | GH127 |
| CAZyme | k141_1052895 | k141_1052895_9 | 15858 | 17585 | + | GH141 |
| TC | k141_1052895 | k141_1052895_10 | 17617 | 18987 | + | 2.A.1.1.74 |
| CAZyme | k141_1052895 | k141_1052895_11 | 18971 | 21082 | + | GH78 |
| CAZyme | k141_1052895 | k141_1052895_12 | 21079 | 23718 | + | GH138 |
| CAZyme | k141_1052895 | k141_1052895_13 | 23730 | 27755 | + | CBM57 | CBM97 | GH137 | GH2 |
| CAZyme | k141_1052895 | k141_1052895_14 | 27790 | 30885 | + | GH2 |
| CAZyme | k141_1052895 | k141_1052895_15 | 30898 | 33714 | + | GH2 |
| CAZyme | k141_1052895 | k141_1052895_16 | 33714 | 36806 | + | GH106 |
Gene ID: k141_1052895_2
Type: TC
Location: 2125 - 5457 (+)
Type: TC
Location: 2125 - 5457 (+)
Gene ID: k141_1052895_3
Type: pfam
Location: 5483 - 7687 (+)
Type: pfam
Location: 5483 - 7687 (+)
Gene ID: k141_1052895_4
Type: TC
Location: 8055 - 9287 (+)
Type: TC
Location: 8055 - 9287 (+)
Gene ID: k141_1052895_5
Type: CAZyme
Location: 9438 - 11120 (-)
Type: CAZyme
Location: 9438 - 11120 (-)
Gene ID: k141_1052895_6
Type:
Location: 11302 - 11553 (+)
Type:
Location: 11302 - 11553 (+)
Gene ID: k141_1052895_7
Type: pfam
Location: 12265 - 13722 (+)
Type: pfam
Location: 12265 - 13722 (+)
Gene ID: k141_1052895_8
Type: CAZyme
Location: 13771 - 15846 (+)
Type: CAZyme
Location: 13771 - 15846 (+)
Gene ID: k141_1052895_9
Type: CAZyme
Location: 15858 - 17585 (+)
Type: CAZyme
Location: 15858 - 17585 (+)
Gene ID: k141_1052895_10
Type: TC
Location: 17617 - 18987 (+)
Type: TC
Location: 17617 - 18987 (+)
Gene ID: k141_1052895_11
Type: CAZyme
Location: 18971 - 21082 (+)
Type: CAZyme
Location: 18971 - 21082 (+)
Gene ID: k141_1052895_12
Type: CAZyme
Location: 21079 - 23718 (+)
Type: CAZyme
Location: 21079 - 23718 (+)
Gene ID: k141_1052895_13
Type: CAZyme
Location: 23730 - 27755 (+)
Type: CAZyme
Location: 23730 - 27755 (+)
Gene ID: k141_1052895_14
Type: CAZyme
Location: 27790 - 30885 (+)
Type: CAZyme
Location: 27790 - 30885 (+)
Gene ID: k141_1052895_15
Type: CAZyme
Location: 30898 - 33714 (+)
Type: CAZyme
Location: 30898 - 33714 (+)
Gene ID: k141_1052895_16
Type: CAZyme
Location: 33714 - 36806 (+)
Type: CAZyme
Location: 33714 - 36806 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp017415455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.