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Cluster: CGMR058053_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_24491 k141_24491_8 9890 10807 + 3.A.1.1.25
TC k141_24491 k141_24491_9 10847 11887 + 3.A.1.1.34
pfam k141_24491 k141_24491_10 11943 12809 + CBM_6
NULL(UNKNOWN) k141_24491 k141_24491_11 12857 15829 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_24491 k141_24491_12 15864 18725 + GH38
pfam k141_24491 k141_24491_13 18729 19682 + Hydrolase | HAD_2
NULL(UNKNOWN) k141_24491 k141_24491_14 19837 23241 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_24491 k141_24491_15 23545 26244 + GH38
CAZyme k141_24491 k141_24491_16 26313 28826 + CBM67 | GH78
CAZyme k141_24491 k141_24491_17 28878 31466 + CBM67 | GH78
Gene ID: k141_24491_8
Type: TC
Location: 9890 - 10807 (+)
Gene ID: k141_24491_9
Type: TC
Location: 10847 - 11887 (+)
Gene ID: k141_24491_10
Type: pfam
Location: 11943 - 12809 (+)
Gene ID: k141_24491_11
Type:
Location: 12857 - 15829 (+)
Gene ID: k141_24491_12
Type: CAZyme
Location: 15864 - 18725 (+)
Gene ID: k141_24491_13
Type: pfam
Location: 18729 - 19682 (+)
Gene ID: k141_24491_14
Type:
Location: 19837 - 23241 (+)
Gene ID: k141_24491_15
Type: CAZyme
Location: 23545 - 26244 (+)
Gene ID: k141_24491_16
Type: CAZyme
Location: 26313 - 28826 (+)
Gene ID: k141_24491_17
Type: CAZyme
Location: 28878 - 31466 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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