Cluster: CGMR058053_CGC33
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR058053
- CGC Family ID: CGCFAM_03636
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_152693 | k141_152693_6 | 7069 | 7929 | - | 3.A.1.1.39 |
| TC | k141_152693 | k141_152693_7 | 7980 | 8909 | - | 3.A.1.1.11 |
| STP | k141_152693 | k141_152693_8 | 8959 | 11883 | - | SBP_bac_1 |
| TF | k141_152693 | k141_152693_9 | 12230 | 13465 | + | GntR |
| CAZyme | k141_152693 | k141_152693_10 | 13603 | 15732 | + | CBM67 | GH78 |
| TF | k141_152693 | k141_152693_11 | 15830 | 16633 | - | HTH_AraC | HTH_AraC |
| pfam | k141_152693 | k141_152693_12 | 16752 | 18077 | + | Oxidored_FMN |
| CAZyme | k141_152693 | k141_152693_13 | 18158 | 19312 | + | GH154 |
Gene ID: k141_152693_6
Type: TC
Location: 7069 - 7929 (-)
Type: TC
Location: 7069 - 7929 (-)
Gene ID: k141_152693_7
Type: TC
Location: 7980 - 8909 (-)
Type: TC
Location: 7980 - 8909 (-)
Gene ID: k141_152693_8
Type: STP
Location: 8959 - 11883 (-)
Type: STP
Location: 8959 - 11883 (-)
Gene ID: k141_152693_9
Type: TF
Location: 12230 - 13465 (+)
Type: TF
Location: 12230 - 13465 (+)
Gene ID: k141_152693_10
Type: CAZyme
Location: 13603 - 15732 (+)
Type: CAZyme
Location: 13603 - 15732 (+)
Gene ID: k141_152693_11
Type: TF
Location: 15830 - 16633 (-)
Type: TF
Location: 15830 - 16633 (-)
Gene ID: k141_152693_12
Type: pfam
Location: 16752 - 18077 (+)
Type: pfam
Location: 16752 - 18077 (+)
Gene ID: k141_152693_13
Type: CAZyme
Location: 18158 - 19312 (+)
Type: CAZyme
Location: 18158 - 19312 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
HGM13222
Species
HGM13222 sp900757485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.