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Cluster: CGMR058053_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_189590 k141_189590_25 23736 24275 + 9.A.11.1.1
TF k141_189590 k141_189590_26 24433 25371 - HTH_AraC
CAZyme k141_189590 k141_189590_27 25873 28245 + GH141
CAZyme k141_189590 k141_189590_28 28393 30384 + GH42
CAZyme k141_189590 k141_189590_29 30433 33561 + GH2
TC k141_189590 k141_189590_30 33654 34616 + 3.A.1.1.10
TC k141_189590 k141_189590_31 34628 35536 + 3.A.1.1.29
TC k141_189590 k141_189590_32 35604 37151 + 3.A.1.1.10
Gene ID: k141_189590_25
Type: TC
Location: 23736 - 24275 (+)
Gene ID: k141_189590_26
Type: TF
Location: 24433 - 25371 (-)
Gene ID: k141_189590_27
Type: CAZyme
Location: 25873 - 28245 (+)
Gene ID: k141_189590_28
Type: CAZyme
Location: 28393 - 30384 (+)
Gene ID: k141_189590_29
Type: CAZyme
Location: 30433 - 33561 (+)
Gene ID: k141_189590_30
Type: TC
Location: 33654 - 34616 (+)
Gene ID: k141_189590_31
Type: TC
Location: 34628 - 35536 (+)
Gene ID: k141_189590_32
Type: TC
Location: 35604 - 37151 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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