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Cluster: CGMR058053_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_181780 k141_181780_23 20028 21311 - GH18
CAZyme k141_181780 k141_181780_24 21450 22460 - CE2
CAZyme k141_181780 k141_181780_25 22656 25424 - GH38
CAZyme k141_181780 k141_181780_26 25603 26856 - GH136
CAZyme k141_181780 k141_181780_27 26884 28647 - GH110
CAZyme k141_181780 k141_181780_28 28703 30175 - GH110
TC k141_181780 k141_181780_29 30217 31209 - 3.A.1.1.41
TC k141_181780 k141_181780_30 31270 32172 - 3.A.1.1.20
CAZyme k141_181780 k141_181780_31 32169 34499 - GH129
pfam k141_181780 k141_181780_32 34535 35152 - Yip1
NULL(UNKNOWN) k141_181780 k141_181780_33 35247 36719 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_181780 k141_181780_34 36739 37623 - 3.A.1.1.11
TC k141_181780 k141_181780_35 37655 38548 - 3.A.1.1.36
Gene ID: k141_181780_23
Type: CAZyme
Location: 20028 - 21311 (-)
Gene ID: k141_181780_24
Type: CAZyme
Location: 21450 - 22460 (-)
Gene ID: k141_181780_25
Type: CAZyme
Location: 22656 - 25424 (-)
Gene ID: k141_181780_26
Type: CAZyme
Location: 25603 - 26856 (-)
Gene ID: k141_181780_27
Type: CAZyme
Location: 26884 - 28647 (-)
Gene ID: k141_181780_28
Type: CAZyme
Location: 28703 - 30175 (-)
Gene ID: k141_181780_29
Type: TC
Location: 30217 - 31209 (-)
Gene ID: k141_181780_30
Type: TC
Location: 31270 - 32172 (-)
Gene ID: k141_181780_31
Type: CAZyme
Location: 32169 - 34499 (-)
Gene ID: k141_181780_32
Type: pfam
Location: 34535 - 35152 (-)
Gene ID: k141_181780_33
Type:
Location: 35247 - 36719 (-)
Gene ID: k141_181780_34
Type: TC
Location: 36739 - 37623 (-)
Gene ID: k141_181780_35
Type: TC
Location: 37655 - 38548 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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