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Cluster: CGMR058053_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23967 k141_23967_31 50888 51781 + 3.A.1.1.23
TC k141_23967 k141_23967_32 51787 52671 + 3.A.1.1.39
pfam k141_23967 k141_23967_33 52698 54848 + NHL | NHL | Yip1
pfam k141_23967 k141_23967_34 54864 57410 + DUF5696
TC k141_23967 k141_23967_35 57451 58374 + 3.A.1.1.11
TC k141_23967 k141_23967_36 58394 59338 + 3.A.1.1.36
pfam k141_23967 k141_23967_37 59514 61817 + Pect-lyase_RHGA_epim | Pect-lyase_RHGA_epim
TC k141_23967 k141_23967_38 61926 62663 + 9.B.20.1.4
TF k141_23967 k141_23967_39 62743 63789 - GntR
pfam k141_23967 k141_23967_40 64282 65073 + Metallophos | Metallophos_2
CAZyme k141_23967 k141_23967_41 65087 68146 + GH38
Gene ID: k141_23967_31
Type: TC
Location: 50888 - 51781 (+)
Gene ID: k141_23967_32
Type: TC
Location: 51787 - 52671 (+)
Gene ID: k141_23967_33
Type: pfam
Location: 52698 - 54848 (+)
Gene ID: k141_23967_34
Type: pfam
Location: 54864 - 57410 (+)
Gene ID: k141_23967_35
Type: TC
Location: 57451 - 58374 (+)
Gene ID: k141_23967_36
Type: TC
Location: 58394 - 59338 (+)
Gene ID: k141_23967_37
Type: pfam
Location: 59514 - 61817 (+)
Gene ID: k141_23967_38
Type: TC
Location: 61926 - 62663 (+)
Gene ID: k141_23967_39
Type: TF
Location: 62743 - 63789 (-)
Gene ID: k141_23967_40
Type: pfam
Location: 64282 - 65073 (+)
Gene ID: k141_23967_41
Type: CAZyme
Location: 65087 - 68146 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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