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Cluster: CGMR058053_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23967 k141_23967_11 17961 18881 + 3.A.1.1.11
TC k141_23967 k141_23967_12 18883 19779 + 3.A.1.1.34
STP k141_23967 k141_23967_13 19794 21899 + TPR_2
pfam k141_23967 k141_23967_14 21914 24430 + DUF5696
TC k141_23967 k141_23967_15 24427 25347 + 3.A.1.1.11
TC k141_23967 k141_23967_16 25364 26293 + 3.A.1.1.29
sulfatase k141_23967 k141_23967_17 26349 27389 + S1_16
CAZyme k141_23967 k141_23967_18 27666 28922 - GH109
CAZyme k141_23967 k141_23967_19 28949 30244 - GH109
Gene ID: k141_23967_11
Type: TC
Location: 17961 - 18881 (+)
Gene ID: k141_23967_12
Type: TC
Location: 18883 - 19779 (+)
Gene ID: k141_23967_13
Type: STP
Location: 19794 - 21899 (+)
Gene ID: k141_23967_14
Type: pfam
Location: 21914 - 24430 (+)
Gene ID: k141_23967_15
Type: TC
Location: 24427 - 25347 (+)
Gene ID: k141_23967_16
Type: TC
Location: 25364 - 26293 (+)
Gene ID: k141_23967_17
Type: sulfatase
Location: 26349 - 27389 (+)
Gene ID: k141_23967_18
Type: CAZyme
Location: 27666 - 28922 (-)
Gene ID: k141_23967_19
Type: CAZyme
Location: 28949 - 30244 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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