Cluster: CGMR058053_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR058053
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_259474 | k141_259474_3 | 2529 | 4043 | - | GH32 |
| CAZyme | k141_259474 | k141_259474_4 | 4176 | 5150 | - | GH130_9 |
| NULL(UNKNOWN) | k141_259474 | k141_259474_5 | 5160 | 6935 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_259474 | k141_259474_6 | 6968 | 9649 | - | GH2 |
| CAZyme | k141_259474 | k141_259474_7 | 9662 | 11203 | - | GH3 |
| NULL(UNKNOWN) | k141_259474 | k141_259474_8 | 11366 | 12613 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_259474 | k141_259474_9 | 12614 | 14011 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_259474 | k141_259474_10 | 14024 | 15040 | - | 3.A.1.1.11 |
| TC | k141_259474 | k141_259474_11 | 15150 | 16031 | - | 3.A.1.1.34 |
| pfam | k141_259474 | k141_259474_12 | 16045 | 18354 | - | DUF5696 |
| pfam | k141_259474 | k141_259474_13 | 18415 | 20472 | - | NHL | Yip1 |
| TC | k141_259474 | k141_259474_14 | 20484 | 21359 | - | 3.A.1.1.39 |
| TC | k141_259474 | k141_259474_15 | 21449 | 22396 | - | 3.A.1.1.11 |
Gene ID: k141_259474_3
Type: CAZyme
Location: 2529 - 4043 (-)
Type: CAZyme
Location: 2529 - 4043 (-)
Gene ID: k141_259474_4
Type: CAZyme
Location: 4176 - 5150 (-)
Type: CAZyme
Location: 4176 - 5150 (-)
Gene ID: k141_259474_5
Type:
Location: 5160 - 6935 (-)
Type:
Location: 5160 - 6935 (-)
Gene ID: k141_259474_6
Type: CAZyme
Location: 6968 - 9649 (-)
Type: CAZyme
Location: 6968 - 9649 (-)
Gene ID: k141_259474_7
Type: CAZyme
Location: 9662 - 11203 (-)
Type: CAZyme
Location: 9662 - 11203 (-)
Gene ID: k141_259474_8
Type:
Location: 11366 - 12613 (-)
Type:
Location: 11366 - 12613 (-)
Gene ID: k141_259474_9
Type:
Location: 12614 - 14011 (-)
Type:
Location: 12614 - 14011 (-)
Gene ID: k141_259474_10
Type: TC
Location: 14024 - 15040 (-)
Type: TC
Location: 14024 - 15040 (-)
Gene ID: k141_259474_11
Type: TC
Location: 15150 - 16031 (-)
Type: TC
Location: 15150 - 16031 (-)
Gene ID: k141_259474_12
Type: pfam
Location: 16045 - 18354 (-)
Type: pfam
Location: 16045 - 18354 (-)
Gene ID: k141_259474_13
Type: pfam
Location: 18415 - 20472 (-)
Type: pfam
Location: 18415 - 20472 (-)
Gene ID: k141_259474_14
Type: TC
Location: 20484 - 21359 (-)
Type: TC
Location: 20484 - 21359 (-)
Gene ID: k141_259474_15
Type: TC
Location: 21449 - 22396 (-)
Type: TC
Location: 21449 - 22396 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
HGM13222
Species
HGM13222 sp900757485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.