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Cluster: CGMR057989_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_39962 k141_39962_17 16755 17363 - 1.A.12.3.1
pfam k141_39962 k141_39962_18 17464 18285 - Cytochrom_C1
TC k141_39962 k141_39962_19 18282 19556 - 3.E.2.1.1
TC k141_39962 k141_39962_20 19556 20152 - 3.D.3.2.1
pfam k141_39962 k141_39962_21 20181 20750 - EFP | EFP_N | Elong-fact-P_C
TC k141_39962 k141_39962_22 20829 21929 - 2.A.56.3.4
TC k141_39962 k141_39962_23 22486 23571 - 2.A.56.3.4
TC k141_39962 k141_39962_24 23742 24839 - 2.A.56.3.4
TC k141_39962 k141_39962_25 25287 26699 - 2.A.56.3.4
TC k141_39962 k141_39962_26 26693 27235 - 2.A.56.3.3
pfam k141_39962 k141_39962_27 27787 28839 - FBPase | FBPase_C
TF k141_39962 k141_39962_28 29118 29540 + FUR
CAZyme k141_39962 k141_39962_29 29525 31138 + GT83
Gene ID: k141_39962_17
Type: TC
Location: 16755 - 17363 (-)
Gene ID: k141_39962_18
Type: pfam
Location: 17464 - 18285 (-)
Gene ID: k141_39962_19
Type: TC
Location: 18282 - 19556 (-)
Gene ID: k141_39962_20
Type: TC
Location: 19556 - 20152 (-)
Gene ID: k141_39962_21
Type: pfam
Location: 20181 - 20750 (-)
Gene ID: k141_39962_22
Type: TC
Location: 20829 - 21929 (-)
Gene ID: k141_39962_23
Type: TC
Location: 22486 - 23571 (-)
Gene ID: k141_39962_24
Type: TC
Location: 23742 - 24839 (-)
Gene ID: k141_39962_25
Type: TC
Location: 25287 - 26699 (-)
Gene ID: k141_39962_26
Type: TC
Location: 26693 - 27235 (-)
Gene ID: k141_39962_27
Type: pfam
Location: 27787 - 28839 (-)
Gene ID: k141_39962_28
Type: TF
Location: 29118 - 29540 (+)
Gene ID: k141_39962_29
Type: CAZyme
Location: 29525 - 31138 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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