Cluster: CGMR057473_CGC7
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR057473
- CGC Family ID: CGCFAM_08746
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_436759 | k141_436759_61 | 64452 | 65771 | - | 2.A.6.6.11 |
| TC | k141_436759 | k141_436759_62 | 65985 | 68150 | + | 8.A.51.1.1 |
| TC | k141_436759 | k141_436759_63 | 68220 | 69986 | + | 2.A.17.1.1 |
| TC | k141_436759 | k141_436759_64 | 70026 | 71561 | + | 2.A.17.1.7 |
| TC | k141_436759 | k141_436759_65 | 71599 | 73710 | + | 2.A.17.1.7 |
| pfam | k141_436759 | k141_436759_66 | 73736 | 74188 | + | Thioredox_DsbH | Thioredoxin_2 | Thioredoxin_7 |
| peptidase | k141_436759 | k141_436759_67 | 74263 | 74934 | - | C40.UPW |
| CAZyme | k141_436759 | k141_436759_68 | 74945 | 76072 | - | GT19 |
| NULL(UNKNOWN) | k141_436759 | k141_436759_69 | 76073 | 76351 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_436759 | k141_436759_70 | 76341 | 77186 | - | SurE |
| TC | k141_436759 | k141_436759_71 | 77300 | 79552 | + | 9.B.174.1.2 |
| TC | k141_436759 | k141_436759_72 | 79558 | 80640 | + | 3.A.1.5.15 |
| CAZyme | k141_436759 | k141_436759_73 | 80643 | 81566 | - | GH25 |
| TC | k141_436759 | k141_436759_74 | 81599 | 82435 | - | 1.A.23.1.1 |
| peptidase | k141_436759 | k141_436759_75 | 82778 | 84166 | + | M20.UPF |
| CAZyme | k141_436759 | k141_436759_76 | 84232 | 85485 | - | GT4 |
Gene ID: k141_436759_61
Type: TC
Location: 64452 - 65771 (-)
Type: TC
Location: 64452 - 65771 (-)
Gene ID: k141_436759_62
Type: TC
Location: 65985 - 68150 (+)
Type: TC
Location: 65985 - 68150 (+)
Gene ID: k141_436759_63
Type: TC
Location: 68220 - 69986 (+)
Type: TC
Location: 68220 - 69986 (+)
Gene ID: k141_436759_64
Type: TC
Location: 70026 - 71561 (+)
Type: TC
Location: 70026 - 71561 (+)
Gene ID: k141_436759_65
Type: TC
Location: 71599 - 73710 (+)
Type: TC
Location: 71599 - 73710 (+)
Gene ID: k141_436759_66
Type: pfam
Location: 73736 - 74188 (+)
Type: pfam
Location: 73736 - 74188 (+)
Gene ID: k141_436759_67
Type: peptidase
Location: 74263 - 74934 (-)
Type: peptidase
Location: 74263 - 74934 (-)
Gene ID: k141_436759_68
Type: CAZyme
Location: 74945 - 76072 (-)
Type: CAZyme
Location: 74945 - 76072 (-)
Gene ID: k141_436759_69
Type:
Location: 76073 - 76351 (-)
Type:
Location: 76073 - 76351 (-)
Gene ID: k141_436759_70
Type: pfam
Location: 76341 - 77186 (-)
Type: pfam
Location: 76341 - 77186 (-)
Gene ID: k141_436759_71
Type: TC
Location: 77300 - 79552 (+)
Type: TC
Location: 77300 - 79552 (+)
Gene ID: k141_436759_72
Type: TC
Location: 79558 - 80640 (+)
Type: TC
Location: 79558 - 80640 (+)
Gene ID: k141_436759_73
Type: CAZyme
Location: 80643 - 81566 (-)
Type: CAZyme
Location: 80643 - 81566 (-)
Gene ID: k141_436759_74
Type: TC
Location: 81599 - 82435 (-)
Type: TC
Location: 81599 - 82435 (-)
Gene ID: k141_436759_75
Type: peptidase
Location: 82778 - 84166 (+)
Type: peptidase
Location: 82778 - 84166 (+)
Gene ID: k141_436759_76
Type: CAZyme
Location: 84232 - 85485 (-)
Type: CAZyme
Location: 84232 - 85485 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.