Cluster: CGMR057348_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR057348
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1019489 | k141_1019489_39 | 39864 | 42056 | - | 3.A.10.1.4 |
| pfam | k141_1019489 | k141_1019489_40 | 42222 | 42641 | + | HIT |
| STP | k141_1019489 | k141_1019489_41 | 42653 | 43879 | + | Pyr_redox_2 |
| TC | k141_1019489 | k141_1019489_42 | 44026 | 45096 | - | 2.A.45.2.6 |
| STP | k141_1019489 | k141_1019489_43 | 45333 | 47054 | - | Fer4 |
| TC | k141_1019489 | k141_1019489_44 | 47059 | 48951 | - | 3.D.1.5.1 |
| TC | k141_1019489 | k141_1019489_45 | 48951 | 49448 | - | 3.D.1.5.1 |
| TC | k141_1019489 | k141_1019489_46 | 49643 | 51442 | - | 3.A.1.135.6 |
| TC | k141_1019489 | k141_1019489_47 | 51423 | 53141 | - | 3.A.1.135.7 |
| TF | k141_1019489 | k141_1019489_48 | 53134 | 53568 | - | MarR |
| CAZyme | k141_1019489 | k141_1019489_49 | 53733 | 54875 | + | GT4 |
| TC | k141_1019489 | k141_1019489_50 | 54834 | 56327 | - | 2.A.22.4.1 |
| TC | k141_1019489 | k141_1019489_51 | 56446 | 59910 | - | 2.A.6.3.6 |
Gene ID: k141_1019489_39
Type: TC
Location: 39864 - 42056 (-)
Type: TC
Location: 39864 - 42056 (-)
Gene ID: k141_1019489_40
Type: pfam
Location: 42222 - 42641 (+)
Type: pfam
Location: 42222 - 42641 (+)
Gene ID: k141_1019489_41
Type: STP
Location: 42653 - 43879 (+)
Type: STP
Location: 42653 - 43879 (+)
Gene ID: k141_1019489_42
Type: TC
Location: 44026 - 45096 (-)
Type: TC
Location: 44026 - 45096 (-)
Gene ID: k141_1019489_43
Type: STP
Location: 45333 - 47054 (-)
Type: STP
Location: 45333 - 47054 (-)
Gene ID: k141_1019489_44
Type: TC
Location: 47059 - 48951 (-)
Type: TC
Location: 47059 - 48951 (-)
Gene ID: k141_1019489_45
Type: TC
Location: 48951 - 49448 (-)
Type: TC
Location: 48951 - 49448 (-)
Gene ID: k141_1019489_46
Type: TC
Location: 49643 - 51442 (-)
Type: TC
Location: 49643 - 51442 (-)
Gene ID: k141_1019489_47
Type: TC
Location: 51423 - 53141 (-)
Type: TC
Location: 51423 - 53141 (-)
Gene ID: k141_1019489_48
Type: TF
Location: 53134 - 53568 (-)
Type: TF
Location: 53134 - 53568 (-)
Gene ID: k141_1019489_49
Type: CAZyme
Location: 53733 - 54875 (+)
Type: CAZyme
Location: 53733 - 54875 (+)
Gene ID: k141_1019489_50
Type: TC
Location: 54834 - 56327 (-)
Type: TC
Location: 54834 - 56327 (-)
Gene ID: k141_1019489_51
Type: TC
Location: 56446 - 59910 (-)
Type: TC
Location: 56446 - 59910 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Coproplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.