Cluster: CGMR057255_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR057255
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_36247 | k141_36247_3 | 1444 | 3171 | + | 2.A.9.3.7 |
| pfam | k141_36247 | k141_36247_4 | 3180 | 4133 | + | Jag_N | HP1451_C |
| pfam | k141_36247 | k141_36247_5 | 4117 | 5481 | + | Ras | MMR_HSR1 | FeoB_N | AIG1 | TrmE_N | MnmE_helical |
| CAZyme | k141_36247 | k141_36247_6 | 5456 | 5875 | - | GT4 |
| CAZyme | k141_36247 | k141_36247_7 | 5902 | 7155 | - | GT4 |
| CAZyme | k141_36247 | k141_36247_8 | 7315 | 8148 | - | GT2 |
| CAZyme | k141_36247 | k141_36247_9 | 8141 | 10018 | - | GT2 | GT2 |
Gene ID: k141_36247_3
Type: TC
Location: 1444 - 3171 (+)
Type: TC
Location: 1444 - 3171 (+)
Gene ID: k141_36247_4
Type: pfam
Location: 3180 - 4133 (+)
Type: pfam
Location: 3180 - 4133 (+)
Gene ID: k141_36247_5
Type: pfam
Location: 4117 - 5481 (+)
Type: pfam
Location: 4117 - 5481 (+)
Gene ID: k141_36247_6
Type: CAZyme
Location: 5456 - 5875 (-)
Type: CAZyme
Location: 5456 - 5875 (-)
Gene ID: k141_36247_7
Type: CAZyme
Location: 5902 - 7155 (-)
Type: CAZyme
Location: 5902 - 7155 (-)
Gene ID: k141_36247_8
Type: CAZyme
Location: 7315 - 8148 (-)
Type: CAZyme
Location: 7315 - 8148 (-)
Gene ID: k141_36247_9
Type: CAZyme
Location: 8141 - 10018 (-)
Type: CAZyme
Location: 8141 - 10018 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_B
Species
Helicobacter_B fennelliae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.