Cluster: CGMR057255_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR057255
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1230 | k141_1230_94 | 102910 | 103680 | + | 3.D.10.1.3 |
| TC | k141_1230 | k141_1230_95 | 103681 | 105651 | + | 3.D.10.1.3 |
| TC | k141_1230 | k141_1230_96 | 105651 | 106376 | + | 3.D.10.1.3 |
| TC | k141_1230 | k141_1230_97 | 106870 | 109119 | - | 1.B.14.1.13 |
| pfam | k141_1230 | k141_1230_98 | 109604 | 110605 | - | PTA_PTB |
| STP | k141_1230 | k141_1230_99 | 110696 | 111907 | - | PALP |
| CAZyme | k141_1230 | k141_1230_100 | 111989 | 113338 | - | GT4 |
Gene ID: k141_1230_94
Type: TC
Location: 102910 - 103680 (+)
Type: TC
Location: 102910 - 103680 (+)
Gene ID: k141_1230_95
Type: TC
Location: 103681 - 105651 (+)
Type: TC
Location: 103681 - 105651 (+)
Gene ID: k141_1230_96
Type: TC
Location: 105651 - 106376 (+)
Type: TC
Location: 105651 - 106376 (+)
Gene ID: k141_1230_97
Type: TC
Location: 106870 - 109119 (-)
Type: TC
Location: 106870 - 109119 (-)
Gene ID: k141_1230_98
Type: pfam
Location: 109604 - 110605 (-)
Type: pfam
Location: 109604 - 110605 (-)
Gene ID: k141_1230_99
Type: STP
Location: 110696 - 111907 (-)
Type: STP
Location: 110696 - 111907 (-)
Gene ID: k141_1230_100
Type: CAZyme
Location: 111989 - 113338 (-)
Type: CAZyme
Location: 111989 - 113338 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_B
Species
Helicobacter_B fennelliae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.