Cluster: CGMR057255_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR057255
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1230 | k141_1230_42 | 46512 | 47363 | + | GT8 |
| pfam | k141_1230 | k141_1230_43 | 47454 | 48890 | + | Radical_SAM |
| CAZyme | k141_1230 | k141_1230_44 | 48887 | 49771 | + | GT2 |
| TC | k141_1230 | k141_1230_45 | 50444 | 52231 | - | 1.B.52.2.1 |
| NULL(UNKNOWN) | k141_1230 | k141_1230_46 | 52245 | 52481 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_1230 | k141_1230_47 | 52496 | 53860 | - | 1.B.60.1.1 |
Gene ID: k141_1230_42
Type: CAZyme
Location: 46512 - 47363 (+)
Type: CAZyme
Location: 46512 - 47363 (+)
Gene ID: k141_1230_43
Type: pfam
Location: 47454 - 48890 (+)
Type: pfam
Location: 47454 - 48890 (+)
Gene ID: k141_1230_44
Type: CAZyme
Location: 48887 - 49771 (+)
Type: CAZyme
Location: 48887 - 49771 (+)
Gene ID: k141_1230_45
Type: TC
Location: 50444 - 52231 (-)
Type: TC
Location: 50444 - 52231 (-)
Gene ID: k141_1230_46
Type:
Location: 52245 - 52481 (-)
Type:
Location: 52245 - 52481 (-)
Gene ID: k141_1230_47
Type: TC
Location: 52496 - 53860 (-)
Type: TC
Location: 52496 - 53860 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_B
Species
Helicobacter_B fennelliae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.