Cluster: CGMR057255_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR057255
- CGC Family ID: CGCFAM_01597
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_54149 | k141_54149_6 | 2748 | 2981 | + | 3.D.1.6.4 |
| pfam | k141_54149 | k141_54149_7 | 3046 | 4284 | + | ketoacyl-synt | Ketoacyl-synt_C |
| pfam | k141_54149 | k141_54149_8 | 4305 | 5234 | + | Carboxyl_trans | ACCA |
| CAZyme | k141_54149 | k141_54149_9 | 5332 | 6486 | + | GT2 |
| TC | k141_54149 | k141_54149_10 | 6486 | 8258 | + | 3.A.7.19.1 |
Gene ID: k141_54149_6
Type: TC
Location: 2748 - 2981 (+)
Type: TC
Location: 2748 - 2981 (+)
Gene ID: k141_54149_7
Type: pfam
Location: 3046 - 4284 (+)
Type: pfam
Location: 3046 - 4284 (+)
Gene ID: k141_54149_8
Type: pfam
Location: 4305 - 5234 (+)
Type: pfam
Location: 4305 - 5234 (+)
Gene ID: k141_54149_9
Type: CAZyme
Location: 5332 - 6486 (+)
Type: CAZyme
Location: 5332 - 6486 (+)
Gene ID: k141_54149_10
Type: TC
Location: 6486 - 8258 (+)
Type: TC
Location: 6486 - 8258 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_B
Species
Helicobacter_B fennelliae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.