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Cluster: CGMR057173_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1223340 k141_1223340_41 45346 46377 + 9.A.40.2.1
TC k141_1223340 k141_1223340_42 46370 47635 + 9.A.40.2.2
TC k141_1223340 k141_1223340_43 47914 49302 + 2.A.40.1.2
pfam k141_1223340 k141_1223340_44 49352 50764 - PK | PK_C
TF k141_1223340 k141_1223340_45 51102 51854 + HTH_DeoR
CAZyme k141_1223340 k141_1223340_46 52011 53192 - CE15
pfam k141_1223340 k141_1223340_47 53371 54072 + VTT_dom
TC k141_1223340 k141_1223340_48 54268 56919 + 3.A.3.2.28
TC k141_1223340 k141_1223340_49 56970 58337 - 2.A.66.1.33
Gene ID: k141_1223340_41
Type: TC
Location: 45346 - 46377 (+)
Gene ID: k141_1223340_42
Type: TC
Location: 46370 - 47635 (+)
Gene ID: k141_1223340_43
Type: TC
Location: 47914 - 49302 (+)
Gene ID: k141_1223340_44
Type: pfam
Location: 49352 - 50764 (-)
Gene ID: k141_1223340_45
Type: TF
Location: 51102 - 51854 (+)
Gene ID: k141_1223340_46
Type: CAZyme
Location: 52011 - 53192 (-)
Gene ID: k141_1223340_47
Type: pfam
Location: 53371 - 54072 (+)
Gene ID: k141_1223340_48
Type: TC
Location: 54268 - 56919 (+)
Gene ID: k141_1223340_49
Type: TC
Location: 56970 - 58337 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
SIG578
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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