Cluster: CGMR056796_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR056796
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_149822 | k141_149822_13 | 13912 | 14991 | + | GH177 |
| pfam | k141_149822 | k141_149822_14 | 15060 | 16595 | + | LytR_cpsA_psr |
| TC | k141_149822 | k141_149822_15 | 16816 | 17724 | + | 2.A.7.3.13 |
Gene ID: k141_149822_13
Type: CAZyme
Location: 13912 - 14991 (+)
Type: CAZyme
Location: 13912 - 14991 (+)
Gene ID: k141_149822_14
Type: pfam
Location: 15060 - 16595 (+)
Type: pfam
Location: 15060 - 16595 (+)
Gene ID: k141_149822_15
Type: TC
Location: 16816 - 17724 (+)
Type: TC
Location: 16816 - 17724 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp902388735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_149822_14 | vegan > omnivore | 1.40110 | 0.00825 |
| k141_149822_14 | vegetarian > omnivore | 1.88116 | 0.01882 |