Cluster: CGMR056796_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR056796
- CGC Family ID: CGCFAM_04350
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_149822 | k141_149822_4 | 2936 | 3805 | + | 2.A.7.7.2 |
| TC | k141_149822 | k141_149822_5 | 3951 | 6512 | - | 3.A.12.1.1 |
| pfam | k141_149822 | k141_149822_6 | 6558 | 7394 | - | BacA |
| STP | k141_149822 | k141_149822_7 | 7680 | 8879 | + | Aminotran_1_2 |
| TC | k141_149822 | k141_149822_8 | 8905 | 9558 | + | 9.B.18.1.2 |
| CAZyme | k141_149822 | k141_149822_9 | 9570 | 10817 | + | GT4 |
Gene ID: k141_149822_4
Type: TC
Location: 2936 - 3805 (+)
Type: TC
Location: 2936 - 3805 (+)
Gene ID: k141_149822_5
Type: TC
Location: 3951 - 6512 (-)
Type: TC
Location: 3951 - 6512 (-)
Gene ID: k141_149822_6
Type: pfam
Location: 6558 - 7394 (-)
Type: pfam
Location: 6558 - 7394 (-)
Gene ID: k141_149822_7
Type: STP
Location: 7680 - 8879 (+)
Type: STP
Location: 7680 - 8879 (+)
Gene ID: k141_149822_8
Type: TC
Location: 8905 - 9558 (+)
Type: TC
Location: 8905 - 9558 (+)
Gene ID: k141_149822_9
Type: CAZyme
Location: 9570 - 10817 (+)
Type: CAZyme
Location: 9570 - 10817 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp902388735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_149822_7 | vegan > omnivore | 2.27612 | 0.00180 |
| k141_149822_7 | vegetarian > omnivore | 2.17578 | 0.01882 |