dbCAN Logo

Cluster: CGMR056445_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_5147 k141_5147_14 12196 13089 - 2.A.7.3.47
TC k141_5147 k141_5147_15 13328 15136 - 3.A.1.5.32
TC k141_5147 k141_5147_16 15538 17340 - 3.A.1.5.32
TC k141_5147 k141_5147_17 17748 19550 - 3.A.1.5.32
TC k141_5147 k141_5147_18 19991 20896 - 3.A.1.5.10
TC k141_5147 k141_5147_19 20911 21876 - 3.A.1.5.32
TC k141_5147 k141_5147_20 21876 22808 - 3.A.1.5.32
TC k141_5147 k141_5147_21 22801 23805 - 3.A.1.5.32
TC k141_5147 k141_5147_22 24929 25657 + 5.A.1.2.7
pfam k141_5147 k141_5147_23 25687 26265 + Thioredoxin | GSHPx | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8
CAZyme k141_5147 k141_5147_24 26396 27208 - CE7
TC k141_5147 k141_5147_25 27381 28934 - 2.A.21.3.20
Gene ID: k141_5147_14
Type: TC
Location: 12196 - 13089 (-)
Gene ID: k141_5147_15
Type: TC
Location: 13328 - 15136 (-)
Gene ID: k141_5147_16
Type: TC
Location: 15538 - 17340 (-)
Gene ID: k141_5147_17
Type: TC
Location: 17748 - 19550 (-)
Gene ID: k141_5147_18
Type: TC
Location: 19991 - 20896 (-)
Gene ID: k141_5147_19
Type: TC
Location: 20911 - 21876 (-)
Gene ID: k141_5147_20
Type: TC
Location: 21876 - 22808 (-)
Gene ID: k141_5147_21
Type: TC
Location: 22801 - 23805 (-)
Gene ID: k141_5147_22
Type: TC
Location: 24929 - 25657 (+)
Gene ID: k141_5147_23
Type: pfam
Location: 25687 - 26265 (+)
Gene ID: k141_5147_24
Type: CAZyme
Location: 26396 - 27208 (-)
Gene ID: k141_5147_25
Type: TC
Location: 27381 - 28934 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Staphylococcales
→
Family
Gemellaceae
→
Genus
Gemella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List