Cluster: CGMR056444_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR056444
- CGC Family ID: CGCFAM_05670
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_33357 | k141_33357_5 | 5871 | 7301 | - | 2.A.73.1.1 |
| pfam | k141_33357 | k141_33357_6 | 7399 | 8292 | - | UbiA |
| NULL(UNKNOWN) | k141_33357 | k141_33357_7 | 8414 | 8749 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_33357 | k141_33357_8 | 8605 | 9960 | - | GH109 |
| TC | k141_33357 | k141_33357_9 | 10014 | 13004 | - | 1.B.14.6.11 |
| CAZyme | k141_33357 | k141_33357_10 | 13140 | 16475 | - | CBM51 | GH31_18 |
Gene ID: k141_33357_5
Type: TC
Location: 5871 - 7301 (-)
Type: TC
Location: 5871 - 7301 (-)
Gene ID: k141_33357_6
Type: pfam
Location: 7399 - 8292 (-)
Type: pfam
Location: 7399 - 8292 (-)
Gene ID: k141_33357_7
Type:
Location: 8414 - 8749 (+)
Type:
Location: 8414 - 8749 (+)
Gene ID: k141_33357_8
Type: CAZyme
Location: 8605 - 9960 (-)
Type: CAZyme
Location: 8605 - 9960 (-)
Gene ID: k141_33357_9
Type: TC
Location: 10014 - 13004 (-)
Type: TC
Location: 10014 - 13004 (-)
Gene ID: k141_33357_10
Type: CAZyme
Location: 13140 - 16475 (-)
Type: CAZyme
Location: 13140 - 16475 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.