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Cluster: CGMR056444_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_70571 k141_70571_6 5084 7396 + GT20
peptidase k141_70571 k141_70571_7 7404 8303 - S11.UPW
TF k141_70571 k141_70571_8 8648 9544 + HTH_1
TC k141_70571 k141_70571_9 9618 11471 - 3.A.1.121.4
TC k141_70571 k141_70571_10 11806 14199 + 1.B.14.6.11
TC k141_70571 k141_70571_11 14274 15971 + 2.A.37.1.5
pfam k141_70571 k141_70571_12 16066 17976 + Peptidase_M20 | Peptidase_M28 | Peptidase_M42
peptidase k141_70571 k141_70571_13 18034 20439 + M13.UPW
TC k141_70571 k141_70571_14 20441 23026 - 3.A.9.1.2
Gene ID: k141_70571_6
Type: CAZyme
Location: 5084 - 7396 (+)
Gene ID: k141_70571_7
Type: peptidase
Location: 7404 - 8303 (-)
Gene ID: k141_70571_8
Type: TF
Location: 8648 - 9544 (+)
Gene ID: k141_70571_9
Type: TC
Location: 9618 - 11471 (-)
Gene ID: k141_70571_10
Type: TC
Location: 11806 - 14199 (+)
Gene ID: k141_70571_11
Type: TC
Location: 14274 - 15971 (+)
Gene ID: k141_70571_12
Type: pfam
Location: 16066 - 17976 (+)
Gene ID: k141_70571_13
Type: peptidase
Location: 18034 - 20439 (+)
Gene ID: k141_70571_14
Type: TC
Location: 20441 - 23026 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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