Cluster: CGMR056444_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR056444
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_128867 | k141_128867_109 | 124306 | 125352 | + | 9.B.157.1.3 |
| TC | k141_128867 | k141_128867_110 | 125530 | 126618 | + | 9.B.157.1.3 |
| pfam | k141_128867 | k141_128867_111 | 126615 | 127100 | + | MreD |
| peptidase | k141_128867 | k141_128867_112 | 127102 | 129168 | + | X52.001 |
| TC | k141_128867 | k141_128867_113 | 129165 | 130277 | + | 2.A.103.1.2 |
| CAZyme | k141_128867 | k141_128867_114 | 130879 | 132000 | + | GH103 |
Gene ID: k141_128867_109
Type: TC
Location: 124306 - 125352 (+)
Type: TC
Location: 124306 - 125352 (+)
Gene ID: k141_128867_110
Type: TC
Location: 125530 - 126618 (+)
Type: TC
Location: 125530 - 126618 (+)
Gene ID: k141_128867_111
Type: pfam
Location: 126615 - 127100 (+)
Type: pfam
Location: 126615 - 127100 (+)
Gene ID: k141_128867_112
Type: peptidase
Location: 127102 - 129168 (+)
Type: peptidase
Location: 127102 - 129168 (+)
Gene ID: k141_128867_113
Type: TC
Location: 129165 - 130277 (+)
Type: TC
Location: 129165 - 130277 (+)
Gene ID: k141_128867_114
Type: CAZyme
Location: 130879 - 132000 (+)
Type: CAZyme
Location: 130879 - 132000 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.