Cluster: CGMR056444_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR056444
- CGC Family ID: CGCFAM_02817
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_128867 | k141_128867_22 | 25221 | 26081 | + | 2.A.21.9.2 |
| TC | k141_128867 | k141_128867_23 | 26068 | 28026 | + | 2.A.21.9.1 |
| NULL(UNKNOWN) | k141_128867 | k141_128867_24 | 28051 | 28275 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_128867 | k141_128867_25 | 28710 | 30614 | + | GT2 |
| peptidase | k141_128867 | k141_128867_26 | 30665 | 31339 | + | S09.UPW |
| TC | k141_128867 | k141_128867_27 | 31343 | 32389 | + | 8.A.59.2.1 |
Gene ID: k141_128867_22
Type: TC
Location: 25221 - 26081 (+)
Type: TC
Location: 25221 - 26081 (+)
Gene ID: k141_128867_23
Type: TC
Location: 26068 - 28026 (+)
Type: TC
Location: 26068 - 28026 (+)
Gene ID: k141_128867_24
Type:
Location: 28051 - 28275 (+)
Type:
Location: 28051 - 28275 (+)
Gene ID: k141_128867_25
Type: CAZyme
Location: 28710 - 30614 (+)
Type: CAZyme
Location: 28710 - 30614 (+)
Gene ID: k141_128867_26
Type: peptidase
Location: 30665 - 31339 (+)
Type: peptidase
Location: 30665 - 31339 (+)
Gene ID: k141_128867_27
Type: TC
Location: 31343 - 32389 (+)
Type: TC
Location: 31343 - 32389 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.