Cluster: CGMR056444_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR056444
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_148155 | k141_148155_3 | 1335 | 4520 | - | CBM32 |
| TC | k141_148155 | k141_148155_4 | 4517 | 5353 | - | 3.A.1.1.23 |
| TC | k141_148155 | k141_148155_5 | 5350 | 6231 | - | 3.A.1.1.20 |
| TC | k141_148155 | k141_148155_6 | 6228 | 7553 | - | 3.A.1.1.41 |
| CAZyme | k141_148155 | k141_148155_7 | 7557 | 9170 | - | GH144 |
Gene ID: k141_148155_3
Type: CAZyme
Location: 1335 - 4520 (-)
Type: CAZyme
Location: 1335 - 4520 (-)
Gene ID: k141_148155_4
Type: TC
Location: 4517 - 5353 (-)
Type: TC
Location: 4517 - 5353 (-)
Gene ID: k141_148155_5
Type: TC
Location: 5350 - 6231 (-)
Type: TC
Location: 5350 - 6231 (-)
Gene ID: k141_148155_6
Type: TC
Location: 6228 - 7553 (-)
Type: TC
Location: 6228 - 7553 (-)
Gene ID: k141_148155_7
Type: CAZyme
Location: 7557 - 9170 (-)
Type: CAZyme
Location: 7557 - 9170 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.