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Cluster: CGMR056137_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_17626 k141_17626_4 2572 5097 - GH2
pfam k141_17626 k141_17626_5 5099 5779 - Lyx_isomer
STP k141_17626 k141_17626_6 5876 7369 - SBP_bac_1
TC k141_17626 k141_17626_7 7406 8356 - 3.A.1.1.29
TC k141_17626 k141_17626_8 8373 9326 - 3.A.1.1.29
TF k141_17626 k141_17626_9 9633 11147 - HTH_AraC | HTH_AraC
TC k141_17626 k141_17626_10 11119 12975 - 8.A.59.2.1
pfam k141_17626 k141_17626_11 13387 14064 - DUF624
CAZyme k141_17626 k141_17626_12 14171 17290 - GH38
CAZyme k141_17626 k141_17626_13 17429 18766 - GH125
Gene ID: k141_17626_4
Type: CAZyme
Location: 2572 - 5097 (-)
Gene ID: k141_17626_5
Type: pfam
Location: 5099 - 5779 (-)
Gene ID: k141_17626_6
Type: STP
Location: 5876 - 7369 (-)
Gene ID: k141_17626_7
Type: TC
Location: 7406 - 8356 (-)
Gene ID: k141_17626_8
Type: TC
Location: 8373 - 9326 (-)
Gene ID: k141_17626_9
Type: TF
Location: 9633 - 11147 (-)
Gene ID: k141_17626_10
Type: TC
Location: 11119 - 12975 (-)
Gene ID: k141_17626_11
Type: pfam
Location: 13387 - 14064 (-)
Gene ID: k141_17626_12
Type: CAZyme
Location: 14171 - 17290 (-)
Gene ID: k141_17626_13
Type: CAZyme
Location: 17429 - 18766 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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