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Cluster: CGMR056137_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_89835 k141_89835_24 25025 26467 - GH1
TC k141_89835 k141_89835_25 26484 28379 - 4.A.1.2.11
pfam k141_89835 k141_89835_26 28629 29474 - PRD | PRD | CAT_RBD
TF k141_89835 k141_89835_27 29814 30572 - GntR
TC k141_89835 k141_89835_28 30819 32369 + 3.A.1.5.33
TC k141_89835 k141_89835_29 32396 33316 + 3.A.1.5.20
TC k141_89835 k141_89835_30 33328 34182 + 3.A.1.5.20
TC k141_89835 k141_89835_31 34214 35191 + 3.A.1.5.20
TC k141_89835 k141_89835_32 35178 36200 + 3.A.1.5.15
Gene ID: k141_89835_24
Type: CAZyme
Location: 25025 - 26467 (-)
Gene ID: k141_89835_25
Type: TC
Location: 26484 - 28379 (-)
Gene ID: k141_89835_26
Type: pfam
Location: 28629 - 29474 (-)
Gene ID: k141_89835_27
Type: TF
Location: 29814 - 30572 (-)
Gene ID: k141_89835_28
Type: TC
Location: 30819 - 32369 (+)
Gene ID: k141_89835_29
Type: TC
Location: 32396 - 33316 (+)
Gene ID: k141_89835_30
Type: TC
Location: 33328 - 34182 (+)
Gene ID: k141_89835_31
Type: TC
Location: 34214 - 35191 (+)
Gene ID: k141_89835_32
Type: TC
Location: 35178 - 36200 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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