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Cluster: CGMR056137_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_79567 k141_79567_21 21900 23621 - 8.A.59.2.1
TC k141_79567 k141_79567_22 23813 25144 + 3.A.1.1.47
TC k141_79567 k141_79567_23 25337 26224 + 3.A.1.1.25
TC k141_79567 k141_79567_24 26234 27088 + 3.A.1.1.18
CAZyme k141_79567 k141_79567_25 27104 29095 + GH151
peptidase k141_79567 k141_79567_26 29126 30565 + M17.UPW
TC k141_79567 k141_79567_27 30537 31373 + 9.B.158.1.1
pfam k141_79567 k141_79567_28 31363 33852 + Transglut_core
NULL(UNKNOWN) k141_79567 k141_79567_29 33966 34262 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_79567 k141_79567_30 34381 35139 - 3.A.1.134.2
Gene ID: k141_79567_21
Type: TC
Location: 21900 - 23621 (-)
Gene ID: k141_79567_22
Type: TC
Location: 23813 - 25144 (+)
Gene ID: k141_79567_23
Type: TC
Location: 25337 - 26224 (+)
Gene ID: k141_79567_24
Type: TC
Location: 26234 - 27088 (+)
Gene ID: k141_79567_25
Type: CAZyme
Location: 27104 - 29095 (+)
Gene ID: k141_79567_26
Type: peptidase
Location: 29126 - 30565 (+)
Gene ID: k141_79567_27
Type: TC
Location: 30537 - 31373 (+)
Gene ID: k141_79567_28
Type: pfam
Location: 31363 - 33852 (+)
Gene ID: k141_79567_29
Type:
Location: 33966 - 34262 (-)
Gene ID: k141_79567_30
Type: TC
Location: 34381 - 35139 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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