dbCAN Logo

Cluster: CGMR056137_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_44062 k141_44062_33 41117 41956 - 3.A.1.1.47
TC k141_44062 k141_44062_34 41956 42831 - 3.A.1.1.41
TC k141_44062 k141_44062_35 42935 44212 - 3.A.1.1.7
TF k141_44062 k141_44062_36 44437 45669 - HTH_AraC | HTH_AraC
pfam k141_44062 k141_44062_37 45840 46688 + Hydrolase | HAD_2
CAZyme k141_44062 k141_44062_38 46702 48411 + GH3
TC k141_44062 k141_44062_39 48508 49911 + 2.A.2.3.1
STP k141_44062 k141_44062_40 50072 51295 + Pyr_redox_2
pfam k141_44062 k141_44062_41 51463 52170 + DUF975
TC k141_44062 k141_44062_42 52385 53758 - 2.A.40.7.6
pfam k141_44062 k141_44062_43 54476 55084 + SBP_bac_8
TC k141_44062 k141_44062_44 55059 56432 + 3.A.1.1.27
TC k141_44062 k141_44062_45 56432 57292 + 3.A.1.1.27
Gene ID: k141_44062_33
Type: TC
Location: 41117 - 41956 (-)
Gene ID: k141_44062_34
Type: TC
Location: 41956 - 42831 (-)
Gene ID: k141_44062_35
Type: TC
Location: 42935 - 44212 (-)
Gene ID: k141_44062_36
Type: TF
Location: 44437 - 45669 (-)
Gene ID: k141_44062_37
Type: pfam
Location: 45840 - 46688 (+)
Gene ID: k141_44062_38
Type: CAZyme
Location: 46702 - 48411 (+)
Gene ID: k141_44062_39
Type: TC
Location: 48508 - 49911 (+)
Gene ID: k141_44062_40
Type: STP
Location: 50072 - 51295 (+)
Gene ID: k141_44062_41
Type: pfam
Location: 51463 - 52170 (+)
Gene ID: k141_44062_42
Type: TC
Location: 52385 - 53758 (-)
Gene ID: k141_44062_43
Type: pfam
Location: 54476 - 55084 (+)
Gene ID: k141_44062_44
Type: TC
Location: 55059 - 56432 (+)
Gene ID: k141_44062_45
Type: TC
Location: 56432 - 57292 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List