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Cluster: CGMR056137_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_97981 k141_97981_42 49412 50698 + GH1
TC k141_97981 k141_97981_43 50741 52105 + 2.A.2.3.2
NULL(UNKNOWN) k141_97981 k141_97981_44 52256 52552 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_97981 k141_97981_45 52562 54970 + GH106
CAZyme k141_97981 k141_97981_46 55113 56579 + GH43_35
CAZyme k141_97981 k141_97981_47 56597 58417 + GH43_28
CAZyme k141_97981 k141_97981_48 58429 60801 + GH2
pfam k141_97981 k141_97981_49 60949 61818 - Abi_2
TF k141_97981 k141_97981_50 62029 63009 - HTH_AraC | HTH_AraC
TC k141_97981 k141_97981_51 63159 64493 + 2.A.2.3.7
CAZyme k141_97981 k141_97981_52 64547 66805 + CBM67 | GH78
Gene ID: k141_97981_42
Type: CAZyme
Location: 49412 - 50698 (+)
Gene ID: k141_97981_43
Type: TC
Location: 50741 - 52105 (+)
Gene ID: k141_97981_44
Type:
Location: 52256 - 52552 (+)
Gene ID: k141_97981_45
Type: CAZyme
Location: 52562 - 54970 (+)
Gene ID: k141_97981_46
Type: CAZyme
Location: 55113 - 56579 (+)
Gene ID: k141_97981_47
Type: CAZyme
Location: 56597 - 58417 (+)
Gene ID: k141_97981_48
Type: CAZyme
Location: 58429 - 60801 (+)
Gene ID: k141_97981_49
Type: pfam
Location: 60949 - 61818 (-)
Gene ID: k141_97981_50
Type: TF
Location: 62029 - 63009 (-)
Gene ID: k141_97981_51
Type: TC
Location: 63159 - 64493 (+)
Gene ID: k141_97981_52
Type: CAZyme
Location: 64547 - 66805 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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