Cluster: CGMR056137_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR056137
- CGC Family ID: CGCFAM_00162
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_46393 | k141_46393_6 | 5526 | 5852 | - | 2.A.78.1.1 |
| TC | k141_46393 | k141_46393_7 | 5852 | 6541 | - | 2.A.78.1.1 |
| TF | k141_46393 | k141_46393_8 | 6693 | 7244 | + | HTH_3 |
| TF | k141_46393 | k141_46393_9 | 7441 | 8274 | + | HTH_AraC |
| TC | k141_46393 | k141_46393_10 | 8517 | 9875 | + | 2.A.2.3.3 |
| CAZyme | k141_46393 | k141_46393_11 | 9967 | 11148 | + | GH5_44 |
| CAZyme | k141_46393 | k141_46393_12 | 11226 | 12872 | + | CBM91 | GH43_11 |
Gene ID: k141_46393_6
Type: TC
Location: 5526 - 5852 (-)
Type: TC
Location: 5526 - 5852 (-)
Gene ID: k141_46393_7
Type: TC
Location: 5852 - 6541 (-)
Type: TC
Location: 5852 - 6541 (-)
Gene ID: k141_46393_8
Type: TF
Location: 6693 - 7244 (+)
Type: TF
Location: 6693 - 7244 (+)
Gene ID: k141_46393_9
Type: TF
Location: 7441 - 8274 (+)
Type: TF
Location: 7441 - 8274 (+)
Gene ID: k141_46393_10
Type: TC
Location: 8517 - 9875 (+)
Type: TC
Location: 8517 - 9875 (+)
Gene ID: k141_46393_11
Type: CAZyme
Location: 9967 - 11148 (+)
Type: CAZyme
Location: 9967 - 11148 (+)
Gene ID: k141_46393_12
Type: CAZyme
Location: 11226 - 12872 (+)
Type: CAZyme
Location: 11226 - 12872 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_46393_12 | vegan > omnivore | 1.33038 | 0.04449 |
| k141_46393_12 | vegetarian > omnivore | 1.18018 | 0.02258 |