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Cluster: CGMR056137_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_40082 k141_40082_5 4815 5690 + GT2
pfam k141_40082 k141_40082_6 5692 6774 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme k141_40082 k141_40082_7 6786 7847 + GT2
CAZyme k141_40082 k141_40082_8 7870 8916 + GT2
TC k141_40082 k141_40082_9 8990 10036 + 9.B.97.1.11
pfam k141_40082 k141_40082_10 10128 12149 - DUF2142
pfam k141_40082 k141_40082_11 12146 13312 - Glyphos_transf
CAZyme k141_40082 k141_40082_12 13536 14696 + GT4
CAZyme k141_40082 k141_40082_13 14698 15390 + GT2
pfam k141_40082 k141_40082_14 15397 15753 + DUF2304
TC k141_40082 k141_40082_15 15867 16643 + 3.A.1.103.6
TC k141_40082 k141_40082_16 16654 17388 + 3.A.1.103.1
NULL(UNKNOWN) k141_40082 k141_40082_17 17403 18005 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_40082 k141_40082_18 18015 20480 + GT2 | GT2
CAZyme k141_40082 k141_40082_19 20545 21525 - GT2
pfam k141_40082 k141_40082_20 21774 23306 + Glucos_trans_II
TC k141_40082 k141_40082_21 23590 24993 + 9.B.18.1.1
Gene ID: k141_40082_5
Type: CAZyme
Location: 4815 - 5690 (+)
Gene ID: k141_40082_6
Type: pfam
Location: 5692 - 6774 (+)
Gene ID: k141_40082_7
Type: CAZyme
Location: 6786 - 7847 (+)
Gene ID: k141_40082_8
Type: CAZyme
Location: 7870 - 8916 (+)
Gene ID: k141_40082_9
Type: TC
Location: 8990 - 10036 (+)
Gene ID: k141_40082_10
Type: pfam
Location: 10128 - 12149 (-)
Gene ID: k141_40082_11
Type: pfam
Location: 12146 - 13312 (-)
Gene ID: k141_40082_12
Type: CAZyme
Location: 13536 - 14696 (+)
Gene ID: k141_40082_13
Type: CAZyme
Location: 14698 - 15390 (+)
Gene ID: k141_40082_14
Type: pfam
Location: 15397 - 15753 (+)
Gene ID: k141_40082_15
Type: TC
Location: 15867 - 16643 (+)
Gene ID: k141_40082_16
Type: TC
Location: 16654 - 17388 (+)
Gene ID: k141_40082_17
Type:
Location: 17403 - 18005 (+)
Gene ID: k141_40082_18
Type: CAZyme
Location: 18015 - 20480 (+)
Gene ID: k141_40082_19
Type: CAZyme
Location: 20545 - 21525 (-)
Gene ID: k141_40082_20
Type: pfam
Location: 21774 - 23306 (+)
Gene ID: k141_40082_21
Type: TC
Location: 23590 - 24993 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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