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Cluster: CGMR056137_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_440 k141_440_99 108171 108848 - 9.B.143.2.3
CAZyme k141_440 k141_440_100 108974 111340 - GH31_3
TC k141_440 k141_440_101 111367 112725 - 2.A.2.3.3
TF k141_440 k141_440_102 112825 113676 - HTH_AraC
pfam k141_440 k141_440_103 113696 116377 - FtsX | FtsX
TC k141_440 k141_440_104 116374 117081 - 3.A.1.134.3
STP k141_440 k141_440_105 117181 118113 - HATPase_c | HisKA
TF k141_440 k141_440_106 118134 118805 - Trans_reg_C
TC k141_440 k141_440_107 119069 120418 + 2.A.66.1.33
CAZyme k141_440 k141_440_108 120526 123597 - GH2
TC k141_440 k141_440_109 123648 125111 - 2.A.3.7.4
Gene ID: k141_440_99
Type: TC
Location: 108171 - 108848 (-)
Gene ID: k141_440_100
Type: CAZyme
Location: 108974 - 111340 (-)
Gene ID: k141_440_101
Type: TC
Location: 111367 - 112725 (-)
Gene ID: k141_440_102
Type: TF
Location: 112825 - 113676 (-)
Gene ID: k141_440_103
Type: pfam
Location: 113696 - 116377 (-)
Gene ID: k141_440_104
Type: TC
Location: 116374 - 117081 (-)
Gene ID: k141_440_105
Type: STP
Location: 117181 - 118113 (-)
Gene ID: k141_440_106
Type: TF
Location: 118134 - 118805 (-)
Gene ID: k141_440_107
Type: TC
Location: 119069 - 120418 (+)
Gene ID: k141_440_108
Type: CAZyme
Location: 120526 - 123597 (-)
Gene ID: k141_440_109
Type: TC
Location: 123648 - 125111 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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