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Cluster: CGMR056137_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_41179 k141_41179_6 8830 9777 + GT2
pfam k141_41179 k141_41179_7 9857 11767 - tRNA-synt_1 | tRNA-synt_1 | tRNA_bind | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Anticodon_3
NULL(UNKNOWN) k141_41179 k141_41179_8 11879 12022 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_41179 k141_41179_9 12334 13317 - GH43_26
CAZyme k141_41179 k141_41179_10 13310 14827 - GH51_1
TC k141_41179 k141_41179_11 14839 15672 - 3.A.1.1.20
TC k141_41179 k141_41179_12 15669 16565 - 3.A.1.1.20
TC k141_41179 k141_41179_13 16629 17897 - 3.A.1.1.40
CAZyme k141_41179 k141_41179_14 17910 19958 - CBM13 | CBM35 | GH93
Gene ID: k141_41179_6
Type: CAZyme
Location: 8830 - 9777 (+)
Gene ID: k141_41179_7
Type: pfam
Location: 9857 - 11767 (-)
Gene ID: k141_41179_8
Type:
Location: 11879 - 12022 (-)
Gene ID: k141_41179_9
Type: CAZyme
Location: 12334 - 13317 (-)
Gene ID: k141_41179_10
Type: CAZyme
Location: 13310 - 14827 (-)
Gene ID: k141_41179_11
Type: TC
Location: 14839 - 15672 (-)
Gene ID: k141_41179_12
Type: TC
Location: 15669 - 16565 (-)
Gene ID: k141_41179_13
Type: TC
Location: 16629 - 17897 (-)
Gene ID: k141_41179_14
Type: CAZyme
Location: 17910 - 19958 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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