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Cluster: CGMR056137_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_75859 k141_75859_1 147 2432 + GH3
TC k141_75859 k141_75859_2 2542 3171 + 2.A.115.2.14
TC k141_75859 k141_75859_3 3383 4765 + 2.A.66.1.33
pfam k141_75859 k141_75859_4 4853 6058 + MFS_1
TF k141_75859 k141_75859_5 6405 6848 + MarR
TC k141_75859 k141_75859_6 6911 9358 + 3.A.1.135.6
TC k141_75859 k141_75859_7 9351 11204 + 3.A.1.135.6
TF k141_75859 k141_75859_8 11668 12327 + Trans_reg_C
STP k141_75859 k141_75859_9 12331 13917 + HATPase_c | HisKA
TC k141_75859 k141_75859_10 14007 14900 + 3.A.1.14.8
pfam k141_75859 k141_75859_11 14893 15669 + ABC2_membrane | ABC2_membrane_3
TC k141_75859 k141_75859_12 15696 17078 + 2.A.25.1.3
Gene ID: k141_75859_1
Type: CAZyme
Location: 147 - 2432 (+)
Gene ID: k141_75859_2
Type: TC
Location: 2542 - 3171 (+)
Gene ID: k141_75859_3
Type: TC
Location: 3383 - 4765 (+)
Gene ID: k141_75859_4
Type: pfam
Location: 4853 - 6058 (+)
Gene ID: k141_75859_5
Type: TF
Location: 6405 - 6848 (+)
Gene ID: k141_75859_6
Type: TC
Location: 6911 - 9358 (+)
Gene ID: k141_75859_7
Type: TC
Location: 9351 - 11204 (+)
Gene ID: k141_75859_8
Type: TF
Location: 11668 - 12327 (+)
Gene ID: k141_75859_9
Type: STP
Location: 12331 - 13917 (+)
Gene ID: k141_75859_10
Type: TC
Location: 14007 - 14900 (+)
Gene ID: k141_75859_11
Type: pfam
Location: 14893 - 15669 (+)
Gene ID: k141_75859_12
Type: TC
Location: 15696 - 17078 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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