Cluster: CGMR055983_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR055983
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_106313 | k141_106313_11 | 12439 | 13674 | - | GH105 |
| pfam | k141_106313 | k141_106313_12 | 13782 | 14450 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | k141_106313 | k141_106313_13 | 14520 | 16685 | - | CE19 | CE8 |
| CAZyme | k141_106313 | k141_106313_14 | 16817 | 18412 | - | GH28 |
| TC | k141_106313 | k141_106313_15 | 18527 | 20086 | - | 2.A.2.5.1 |
Gene ID: k141_106313_11
Type: CAZyme
Location: 12439 - 13674 (-)
Type: CAZyme
Location: 12439 - 13674 (-)
Gene ID: k141_106313_12
Type: pfam
Location: 13782 - 14450 (-)
Type: pfam
Location: 13782 - 14450 (-)
Gene ID: k141_106313_13
Type: CAZyme
Location: 14520 - 16685 (-)
Type: CAZyme
Location: 14520 - 16685 (-)
Gene ID: k141_106313_14
Type: CAZyme
Location: 16817 - 18412 (-)
Type: CAZyme
Location: 16817 - 18412 (-)
Gene ID: k141_106313_15
Type: TC
Location: 18527 - 20086 (-)
Type: TC
Location: 18527 - 20086 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp027669365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_106313_11 | vegan > omnivore | 1.02321 | 0.00701 |