Cluster: CGMR055983_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR055983
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_71207 | k141_71207_40 | 39392 | 40318 | - | CE7 |
| TC | k141_71207 | k141_71207_41 | 40450 | 41277 | - | 3.A.1.5.27 |
| TC | k141_71207 | k141_71207_42 | 41278 | 43293 | - | 3.A.1.5.25 |
| TC | k141_71207 | k141_71207_43 | 43297 | 44253 | - | 3.A.1.5.38 |
| TC | k141_71207 | k141_71207_44 | 44411 | 46024 | - | 3.A.1.5.27 |
| pfam | k141_71207 | k141_71207_45 | 46390 | 48330 | - | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | k141_71207 | k141_71207_46 | 48337 | 50019 | - | 2.A.66.4.4 |
Gene ID: k141_71207_40
Type: CAZyme
Location: 39392 - 40318 (-)
Type: CAZyme
Location: 39392 - 40318 (-)
Gene ID: k141_71207_41
Type: TC
Location: 40450 - 41277 (-)
Type: TC
Location: 40450 - 41277 (-)
Gene ID: k141_71207_42
Type: TC
Location: 41278 - 43293 (-)
Type: TC
Location: 41278 - 43293 (-)
Gene ID: k141_71207_43
Type: TC
Location: 43297 - 44253 (-)
Type: TC
Location: 43297 - 44253 (-)
Gene ID: k141_71207_44
Type: TC
Location: 44411 - 46024 (-)
Type: TC
Location: 44411 - 46024 (-)
Gene ID: k141_71207_45
Type: pfam
Location: 46390 - 48330 (-)
Type: pfam
Location: 46390 - 48330 (-)
Gene ID: k141_71207_46
Type: TC
Location: 48337 - 50019 (-)
Type: TC
Location: 48337 - 50019 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp027669365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.