Cluster: CGMR055865_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR055865
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_193573 | k141_193573_6 | 5240 | 6451 | + | 9.B.146.1.3 |
| pfam | k141_193573 | k141_193573_7 | 6456 | 7787 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | k141_193573 | k141_193573_8 | 7809 | 9053 | + | 2.A.103.1.3 |
| CAZyme | k141_193573 | k141_193573_9 | 9060 | 10154 | + | GT28 |
| pfam | k141_193573 | k141_193573_10 | 10158 | 11507 | + | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| NULL(UNKNOWN) | k141_193573 | k141_193573_11 | 11512 | 12249 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_193573 | k141_193573_12 | 12258 | 13703 | + | 9.B.157.1.2 |
Gene ID: k141_193573_6
Type: TC
Location: 5240 - 6451 (+)
Type: TC
Location: 5240 - 6451 (+)
Gene ID: k141_193573_7
Type: pfam
Location: 6456 - 7787 (+)
Type: pfam
Location: 6456 - 7787 (+)
Gene ID: k141_193573_8
Type: TC
Location: 7809 - 9053 (+)
Type: TC
Location: 7809 - 9053 (+)
Gene ID: k141_193573_9
Type: CAZyme
Location: 9060 - 10154 (+)
Type: CAZyme
Location: 9060 - 10154 (+)
Gene ID: k141_193573_10
Type: pfam
Location: 10158 - 11507 (+)
Type: pfam
Location: 10158 - 11507 (+)
Gene ID: k141_193573_11
Type:
Location: 11512 - 12249 (+)
Type:
Location: 11512 - 12249 (+)
Gene ID: k141_193573_12
Type: TC
Location: 12258 - 13703 (+)
Type: TC
Location: 12258 - 13703 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Species
Flavobacterium sp030152225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.