Cluster: CGMR055865_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR055865
- CGC Family ID: CGCFAM_00746
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_219747 | k141_219747_2 | 334 | 2751 | - | 3.A.3.5.18 |
| TF | k141_219747 | k141_219747_3 | 2839 | 3402 | - | HTH_AraC |
| pfam | k141_219747 | k141_219747_4 | 3645 | 4220 | + | DUF4199 |
| CAZyme | k141_219747 | k141_219747_5 | 4228 | 5199 | + | GT2 |
| pfam | k141_219747 | k141_219747_6 | 5211 | 6938 | + | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TC | k141_219747 | k141_219747_7 | 7007 | 8836 | + | 3.A.1.106.2 |
Gene ID: k141_219747_2
Type: TC
Location: 334 - 2751 (-)
Type: TC
Location: 334 - 2751 (-)
Gene ID: k141_219747_3
Type: TF
Location: 2839 - 3402 (-)
Type: TF
Location: 2839 - 3402 (-)
Gene ID: k141_219747_4
Type: pfam
Location: 3645 - 4220 (+)
Type: pfam
Location: 3645 - 4220 (+)
Gene ID: k141_219747_5
Type: CAZyme
Location: 4228 - 5199 (+)
Type: CAZyme
Location: 4228 - 5199 (+)
Gene ID: k141_219747_6
Type: pfam
Location: 5211 - 6938 (+)
Type: pfam
Location: 5211 - 6938 (+)
Gene ID: k141_219747_7
Type: TC
Location: 7007 - 8836 (+)
Type: TC
Location: 7007 - 8836 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Species
Flavobacterium sp030152225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.