Cluster: CGMR055861_CGC5
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR055861
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_135927 | k141_135927_24 | 30410 | 31900 | - | 9.A.11.1.2 |
| STP | k141_135927 | k141_135927_25 | 32597 | 33214 | + | TetR_N |
| TC | k141_135927 | k141_135927_26 | 33301 | 35079 | + | 3.A.1.21.1 |
| TC | k141_135927 | k141_135927_27 | 35076 | 36806 | + | 3.A.1.21.1 |
| pfam | k141_135927 | k141_135927_28 | 37161 | 39206 | - | NAGPA |
| CAZyme | k141_135927 | k141_135927_29 | 39907 | 42129 | + | GT4 |
| TC | k141_135927 | k141_135927_30 | 42506 | 43996 | + | 2.A.66.4.7 |
| TC | k141_135927 | k141_135927_31 | 44004 | 45857 | + | 9.B.67.1.1 |
| CAZyme | k141_135927 | k141_135927_32 | 45854 | 46978 | + | GT4 |
Gene ID: k141_135927_24
Type: TC
Location: 30410 - 31900 (-)
Type: TC
Location: 30410 - 31900 (-)
Gene ID: k141_135927_25
Type: STP
Location: 32597 - 33214 (+)
Type: STP
Location: 32597 - 33214 (+)
Gene ID: k141_135927_26
Type: TC
Location: 33301 - 35079 (+)
Type: TC
Location: 33301 - 35079 (+)
Gene ID: k141_135927_27
Type: TC
Location: 35076 - 36806 (+)
Type: TC
Location: 35076 - 36806 (+)
Gene ID: k141_135927_28
Type: pfam
Location: 37161 - 39206 (-)
Type: pfam
Location: 37161 - 39206 (-)
Gene ID: k141_135927_29
Type: CAZyme
Location: 39907 - 42129 (+)
Type: CAZyme
Location: 39907 - 42129 (+)
Gene ID: k141_135927_30
Type: TC
Location: 42506 - 43996 (+)
Type: TC
Location: 42506 - 43996 (+)
Gene ID: k141_135927_31
Type: TC
Location: 44004 - 45857 (+)
Type: TC
Location: 44004 - 45857 (+)
Gene ID: k141_135927_32
Type: CAZyme
Location: 45854 - 46978 (+)
Type: CAZyme
Location: 45854 - 46978 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.