Cluster: CGMR055861_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR055861
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_126235 | k141_126235_5 | 2322 | 4547 | + | GH65 |
| CAZyme | k141_126235 | k141_126235_6 | 5470 | 6267 | + | CE4 |
| pfam | k141_126235 | k141_126235_7 | 6339 | 6986 | + | SSB |
| pfam | k141_126235 | k141_126235_8 | 7077 | 7274 | + | SASP |
| TC | k141_126235 | k141_126235_9 | 7416 | 9155 | - | 3.A.1.135.5 |
| TC | k141_126235 | k141_126235_10 | 9152 | 10888 | - | 3.A.1.135.5 |
Gene ID: k141_126235_5
Type: CAZyme
Location: 2322 - 4547 (+)
Type: CAZyme
Location: 2322 - 4547 (+)
Gene ID: k141_126235_6
Type: CAZyme
Location: 5470 - 6267 (+)
Type: CAZyme
Location: 5470 - 6267 (+)
Gene ID: k141_126235_7
Type: pfam
Location: 6339 - 6986 (+)
Type: pfam
Location: 6339 - 6986 (+)
Gene ID: k141_126235_8
Type: pfam
Location: 7077 - 7274 (+)
Type: pfam
Location: 7077 - 7274 (+)
Gene ID: k141_126235_9
Type: TC
Location: 7416 - 9155 (-)
Type: TC
Location: 7416 - 9155 (-)
Gene ID: k141_126235_10
Type: TC
Location: 9152 - 10888 (-)
Type: TC
Location: 9152 - 10888 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.