Cluster: CGMR055861_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR055861
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_147880 | k141_147880_9 | 11357 | 12238 | + | CE4 |
| CAZyme | k141_147880 | k141_147880_10 | 12448 | 14946 | + | CBM67 | GH78 |
| NULL(UNKNOWN) | k141_147880 | k141_147880_11 | 15315 | 15422 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_147880 | k141_147880_12 | 15685 | 18366 | + | 3.A.3.2.21 |
| pfam | k141_147880 | k141_147880_13 | 19255 | 19899 | - | Methyltransf_4 | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 |
| TC | k141_147880 | k141_147880_14 | 19926 | 20573 | - | 1.C.113.1.1 |
Gene ID: k141_147880_9
Type: CAZyme
Location: 11357 - 12238 (+)
Type: CAZyme
Location: 11357 - 12238 (+)
Gene ID: k141_147880_10
Type: CAZyme
Location: 12448 - 14946 (+)
Type: CAZyme
Location: 12448 - 14946 (+)
Gene ID: k141_147880_11
Type:
Location: 15315 - 15422 (-)
Type:
Location: 15315 - 15422 (-)
Gene ID: k141_147880_12
Type: TC
Location: 15685 - 18366 (+)
Type: TC
Location: 15685 - 18366 (+)
Gene ID: k141_147880_13
Type: pfam
Location: 19255 - 19899 (-)
Type: pfam
Location: 19255 - 19899 (-)
Gene ID: k141_147880_14
Type: TC
Location: 19926 - 20573 (-)
Type: TC
Location: 19926 - 20573 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.